AT4G26890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.437 nucleus 0.295 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : mitogen-activated protein kinase kinase kinase 16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of MEKK subfamily | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
mitogen-activated protein kinase kinase kinase 16 (MAPKKK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 15 (TAIR:AT5G55090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13512072..13513406 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49630.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.42 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 444 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEINWTRGPI IGRGSTATVS IAISSSGELF AVKSADLSSS SLLQKEQSIL STLSSPHMVK YIGTGLTRES NGLVYNILME YVSGGNLHDL IKNSGGKLPE 101: PEIRSYTRQI LNGLVYLHER GIVHCDLKSH NVLVEENGVL KIADMGCAKS VDKSEFSGTP AFMAPEVARG EEQRFPADVW ALGCTMIEMM TGSSPWPELN 201: DVVAAMYKIG FSGESPAIPA WISDKAKDFL KNCLKEDQKQ RWTVEELLKH PFLDDDEESQ TSDCLKNKTS SPSTVLDQRF WDSCESSKSH LVSIDHEDPF 301: AEYSESLDSP ADRIEKLAGD EFSSLLDWDT EDDGGWIQVR GEKHKETEKR DGDEDVICVE ATSSSQTIEE VEDWISNQDS LFSEYSSDDI INNFYSNVAI 401: QGNLIAFHYC TDEDENVSIK NMFRTNNKHL FFKLQAHVKF TNQV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)