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AT4G25434.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.900
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nudix hydrolase homolog 10 (NUDT10); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 1857 Blast hits to 1857 proteins in 579 species: Archae - 36; Bacteria - 1096; Metazoa - 164; Fungi - 9; Plants - 175; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G25434-MONOMERBioCyc:ARA:GQT-1933-MONOMERDNASU:828648EC:3.6.1.-
EC:3.6.1.13EC:3.6.1.22EMBL:AL022197EMBL:BT010765
EMBL:BT010987EMBL:CP002687EnsemblPlants:AT4G25434EnsemblPlants:AT4G25434.1
entrez:828648Gene3D:3.90.79.10GeneID:828648Genevisible:Q6NPD7
GO:GO:0000210GO:GO:0046872GO:GO:0047631GO:GO:0051287
hmmpanther:PTHR13994hmmpanther:PTHR13994:SF14HOGENOM:HOG000240943InParanoid:Q6NPD7
InterPro:IPR000086InterPro:IPR003293InterPro:IPR015797InterPro:IPR020084
KEGG:00230+3.6.1.-KEGG:00332+3.6.1.-KEGG:00790+3.6.1.-KEGG:ath:AT4G25434
OMA:QAAVQQWPfam:PF00293Pfam:Q6NPD7Pfscan:PS51462
PhylomeDB:Q6NPD7PIR:T05803PRIDE:Q6NPD7PRINTS:PR01356
PRO:PR:Q6NPD7PROSITE:PS00893PROSITE:PS51462ProteinModelPortal:Q6NPD7
Proteomes:UP000006548RefSeq:NP_001031713.1RefSeq:NP_849443.2scanprosite:PS00893
SMR:Q6NPD7SUPFAM:SSF55811TAIR:AT4G25434tair10-symbols:ATNUDT10
tair10-symbols:NUDT10UniGene:At.47131UniProt:Q6NPD7
Coordinates (TAIR10) chr4:-:13004043..13005771
Molecular Weight (calculated) 31817.90 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.31
Length 277 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDQEAPLRN GVEHKIFEVL PFVDDDYGGV IVEMKTPMDT KNFVAALRDS FEQWRLQGKK GVWLNLPLSH VNLVEPAVKE GFRYHHAEPT YLMLVYWIPE
101: AESTIPLNAS HRVRVGAVVL NHNKEEKYGS LCGSGIWKIP TGVVDEGEEI FAAAIREVKE ETGIDTEFLE ILAFCQTHES FFAKSDLFFV CLLRPTSFDI
201: QKQDLEIEAA QWMRFEDSAS QPITHKNDLF KDIHHICSMK MEKSYSGFSK KPITTFFDDK LGYLYLNKQE DMEQPIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)