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AT4G21140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWYSeggNOG:ENOG410Y75AEMBL:CP002687EnsemblPlants:AT4G21140
EnsemblPlants:AT4G21140.1entrez:827862GeneID:827862Gramene:AT4G21140.1
hmmpanther:PTHR13359hmmpanther:PTHR13359:SF2InParanoid:F4JIM4KEGG:ath:AT4G21140
OMA:ISDQCINPaxDb:F4JIM4PRIDE:F4JIM4ProteinModelPortal:F4JIM4
Proteomes:UP000006548RefSeq:NP_193846.4SMR:F4JIM4STRING:3702.AT4G21140.1
TAIR:AT4G21140UniGene:At.65011UniProt:F4JIM4
Coordinates (TAIR10) chr4:-:11277491..11278222
Molecular Weight (calculated) 27004.20 Da
IEP (calculated) 10.92
GRAVY (calculated) -0.64
Length 243 amino acids
Sequence (TAIR10)
(BLAST)
001: MIRFARPKPI IDSVSYNLLQ KCYASGTPKG KSKLKTGQSL KRNKLTIKKG GGNGGGRGGD EVDKGKGRIS DQCINAPCPV RYLRPKERER EARREKLGLI
101: SKARQKEIDF QKKGGSFTMG VTTAPMRIGT PGLDYISLGI FTEDELPKYK VTVEDGIRLA KEYSRVLMRE HRARRVAEIS LMKMRNAAVE ALPENLKKAA
201: LVRDLTPFPV SRGTATLTPP IEGYLERIMN AAARKSSGKE KLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)