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AT1G14060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GCK domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GCK domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891); BEST Arabidopsis thaliana protein match is: GCK domain-containing protein (TAIR:AT5G02210.1); Has 325 Blast hits to 285 proteins in 75 species: Archae - 0; Bacteria - 2; Metazoa - 95; Fungi - 33; Plants - 117; Viruses - 2; Other Eukaryotes - 76 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3CSeggNOG:ENOG410Y5DTEMBL:AC007576EMBL:AK118826
EMBL:BT005619EMBL:CP002684EnsemblPlants:AT1G14060EnsemblPlants:AT1G14060.1
entrez:837966GeneID:837966Gramene:AT1G14060.1hmmpanther:PTHR34357
hmmpanther:PTHR34357:SF2InterPro:IPR012891KEGG:ath:AT1G14060ncoils:Coil
OMA:VETCFETPfam:PF07802PhylomeDB:Q9XI82PIR:H86273
Proteomes:UP000006548RefSeq:NP_849659.1SMR:Q9XI82STRING:3702.AT1G14060.1
SwissPalm:Q9XI82TAIR:AT1G14060UniGene:At.41994UniProt:Q9XI82
Coordinates (TAIR10) chr1:-:4817354..4817893
Molecular Weight (calculated) 19428.00 Da
IEP (calculated) 3.98
GRAVY (calculated) -1.06
Length 179 amino acids
Sequence (TAIR10)
(BLAST)
001: MGITSSTDPK TETFSDPKSQ NNEEAPPAKS EKLGDASPST PAPSEELGDS STVWRDPEDS ESDEKPEEGG GGDADGEEEG ECGFCLFMKG GGCKDSFVAW
101: EECVEAAEKN KEDIVTNCME VTSMLKKCMD EHSDYYQPIL AAEKAAEAEV KKELEAEKKK EEEEKISEEE VAAKKQAQG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)