AT4G05440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.964 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : temperature sensing protein-related | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
embryo sac development arrest 35 (EDA35); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cell division cycle, Cdc123 (InterPro:IPR016525), D123 (InterPro:IPR009772); Has 393 Blast hits to 382 proteins in 184 species: Archae - 0; Bacteria - 4; Metazoa - 112; Fungi - 157; Plants - 55; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:2757274..2758275 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38779.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.27 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKEDEVNRCQ IQNWYPRFKS LTIKTKFHKL PESFINYLID DSGPFLLPHS VTNEDAMPNR VHNFEEEDDF QVPEEASDDE PLNRPSFPEL EIEIRESIET 101: LGGTIIPKLN WSSPKDAAWI SPSQNLSCTC FNEIALLFRS SDSLTHDLFN AYDSCSDKVS SRPESFYLAL RKWYPSLKPE MEFRCFVKSN ELVGICQREV 201: TTFYPVLLNE KDLLKGLIEE FFDDKIRFEF ESENYTFDVY VTKERRVKLI DFNTWCGSTL PLMYTWEELE KIHGECDELE LRIVESRLSV LPGLKTAVPY 301: DYLDVSAGSG WAQVLKIVEE EFQKDDQSSD EVA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)