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AT4G16770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:12154131 (2002): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, flavonoid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G16765.1); Has 6583 Blast hits to 6566 proteins in 839 species: Archae - 0; Bacteria - 934; Metazoa - 52; Fungi - 818; Plants - 3817; Viruses - 0; Other Eukaryotes - 962 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3491eggNOG:KOG0143EMBL:AF324704EMBL:AJ288957
EMBL:AY042891EMBL:AY081490EnsemblPlants:AT4G16770EnsemblPlants:AT4G16770.1
ExpressionAtlas:Q9M3R7Gene3D:2.60.120.330GO:GO:0005506GO:GO:0016491
gramene_pathway:1.14.11.23gramene_pathway:PWY-3101hmmpanther:PTHR10209hmmpanther:PTHR10209:SF214
InterPro:IPR002283InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443
PaxDb:Q9M3R7Pfam:PF03171Pfam:PF14226Pfscan:PS51471
PIR:H85186PRINTS:PR00682PROSITE:PS51471ProteinModelPortal:Q9M3R7
SUPFAM:SSF51197UniProt:C0Z2M1UniProt:Q9M3R7UniProt:Q9SUK7
Coordinates (TAIR10) chr4:-:9434571..9437168
Molecular Weight (calculated) 36387.40 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.28
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MKYNRDKKNK MGTALKLPII DLSSPEKLST SRLIRQACLD HGFFYLTNHG VSEELMEGVL IESKKLFSLP LDEKMVMARH GFRGYSPLYD EKLESSSTSI
101: GDSKEMFTFG SSEGVLGQLY PNKWPLEELL PLWRPTMECY YKNVMDVGKK LFGLVALALN LEENYFEQVG AFNDQAAVVR LLRYSGESNS SGEETCGASA
201: HSDFGMITLL ATDGVAGLQV CRDKDKEPKV WEDVAGIKGT FVVNIGDLME RWTNGLFRST LHRVVSVGKE RFSVAVFVDP DPNCVVECLE SCCSETSPPK
301: FPPVRARDYF HERFSQTLAS YSGSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)