AT4G14940.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : amine oxidase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
amine oxidase 1 (AO1); FUNCTIONS IN: primary amine oxidase activity, copper ion binding; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1545 Blast hits to 1541 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 250; Fungi - 453; Plants - 241; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:8541879..8544304 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 73787.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 650 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MNTSILAILF LIQCVFTLGL HFHPLDPLTP QEINKTSFIV KKSHLGNLKD LTFHYLDLEE PNKSHVLQWL SPNPSKKPPP PRRRSFVVVR AGGQTYELII 101: DLTTSKIASS RIYTGHGFPS FTFIELFKAS KLPLTYPPFK KSILDRSLNI SEVSCIPFTV GWYGETTTRR ELKASCFYRD GSVNVFTRPI EGITVTIDVD 201: SMQVIKYSDR FRKPIPDKEG NDFRTKHRPF PFFCNVSDTG FKILGNRVKW ANWKFHVGFT ARAGVTISTA SVLDPRTKRF RRVMYRGHVS ETFVPYMDPT 301: YEWYYRTFMD IGEFGFGRSA VNLQPLIDCP QNAAFLDGHV AGPDGTAQKM TNVMCVFEKN GYGASFRHTE INVPGQVITS GEAEISLVVR MVATLGNYDY 401: IVDWEFKKNG AIRVGVDLTG VLEVKATSYT SNDQITENVY GTLVAKNTIA VNHDHYLTYY LDLDVDGNGN SLVKAKLKTV RVTEVNKTSS RRKSYWTVVK 501: ETAKTEADGR VRLGSDPVEL LIVNPNKKTK IGNTVGYRLI PEHLQATSLL TDDDYPELRA GYTKYPVWVT AYDRSERWAG GFYSDRSRGD DGLAVWSSRN 601: REIENKDIVM WYNVGFHHIP YQEDFPVMPT LHGGFTLRPS NFFDNDPLIG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)