AT4G14780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G22750.1); Has 129366 Blast hits to 127977 proteins in 4864 species: Archae - 140; Bacteria - 14193; Metazoa - 48715; Fungi - 11899; Plants - 33617; Viruses - 635; Other Eukaryotes - 20167 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8492989..8494480 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40727.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.05 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 364 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKKSEEDGN NTTKEKIFRA DKIDLKSLDR QLEKHLSRVW SRNLEVNPKA KEEWEIDLAK LETSNVIARG TYGTVYKGIY DGQDVAVKVL DWEDDGNETT 101: AKTATNRALF RQEVTVWHKL NHPNVTKFVG ASMGTTNLNI RSADSKGSLP QQACCVVVEY LPGGTLKQHL IRHKSKKLAF KAVIKLALDL ARGLSYLHSE 201: KIVHRDVKTE NMLLDAQKNL KIADFGVARV EALNPKDMTG ETGTLGYMAP EVIDGKPYNR RCDVYSFGIC LWEIYCCDMP YPDLSFVDVS SAVVLHNLRP 301: EIPRCCPTAL AGIMKTCWDG NPQKRPEMKE VVKMLEGVDT SKGGGMIPED QSRGCFCFAP ARGP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)