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AT4G14100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : transferases, transferring glycosyl groups
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVPSeggNOG:ENOG4111MP0EMBL:AK175690EMBL:AK176539
EMBL:AL161538EMBL:AY087398EMBL:BT024590EMBL:CP002687
EMBL:Z97335EnsemblPlants:AT4G14100EnsemblPlants:AT4G14100.1entrez:827045
GeneID:827045Genevisible:Q67YC9GO:GO:0005773Gramene:AT4G14100.1
hmmpanther:PTHR33880hmmpanther:PTHR33880:SF3HOGENOM:HOG000240559KEGG:ath:AT4G14100
OMA:RPLIVIVPaxDb:Q67YC9Pfam:Q67YC9PhylomeDB:Q67YC9
PIR:B71402PRIDE:Q67YC9PRO:PR:Q67YC9Proteomes:UP000006548
RefSeq:NP_567420.1TAIR:AT4G14100TMHMM:TMhelixUniGene:At.27292
UniGene:At.50337UniProt:Q67YC9
Coordinates (TAIR10) chr4:+:8120749..8122288
Molecular Weight (calculated) 23931.50 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.23
Length 206 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFRRPLIVI VIFIYITAGV KIAAADEPVP TPWPHQFHAL MFMNYSGDLS MIDLWYDWTN GRNFNIIQEQ LGGITYDLEW NNGTSFFYTL DESKSCRSGQ
101: LEVGILRPNW LDGAKYLGQQ NVSGFLCNVW EKVDFIWYYE DVETKRPVQW IFYTGREAHI MTYEVGAVLE DEKWQAPVYC FNKEKKSLST KGALSEFKGY
201: KEKAAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)