AT4G12130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycine cleavage T-protein family | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); Has 3767 Blast hits to 3765 proteins in 1151 species: Archae - 14; Bacteria - 1914; Metazoa - 108; Fungi - 149; Plants - 51; Viruses - 0; Other Eukaryotes - 1531 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7263640..7265425 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43530.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.69 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 393 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFRFNFRREI SKYTGIYHRK IHSGLEDAGP MASRLKSRSV VRFSGPDTVK FLQGLLTNDV RRFGESSGEK NSAVPTPNMA SVTNPPMYAA LLTPQGRFLY 101: DFFLYSPSRP DEKLDRTGSG PGSDSGRDGS VELFADVDVD VLDELLETLK KYRLRSKVDI ENVAEEFSCW QRYGRNLTGS SSVGWGGGVD RAGESTASGN 201: KYGWQWYKDP RLECLGYRSI FPSDATPPLV EADKETDESN YLLWRLEHGV AEGSAEIPKG EAIPLEYNFV GLNAISFDKG CYVGQELIAR THHRGVIRKR 301: LIPLRFIDSN GKELNQKIAA GAEVVESGTG KKMGTVSTAL GSRGMGVMRV EEAFKPSAEL AVKDSEEVKV EAIKPTWWPA EWFQQNQSGV AAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)