AT4G11440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.559 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mitochondrial substrate carrier family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26651 Blast hits to 14053 proteins in 444 species: Archae - 0; Bacteria - 6; Metazoa - 11179; Fungi - 8014; Plants - 4538; Viruses - 0; Other Eukaryotes - 2914 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:6955850..6958553 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 69396.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.42 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||
| Length | 628 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSSTKGSVK KSSIKHSCNL AEVKRKLSKI SDHHSHVEYA YAFQRDNRER VDTRLSQILS RDALISAVDL LWDRSGFVSL KEGNFDYVDR DEVSSEKAKS 101: QLSSTPQSRV RLLGVAEKMY SFDPYNRKSL LNQTDGSKSI CGSCKGIGFP FEARWKTLYS WMEGVLPSST RYHEEGAEIE KRENFEGCIL NPVSSKEELA 201: SRNGDGCDCV FDAIGAKDQS TVIEPRSLLL ATVAESVVDT RVSRSNDVNY LFLLYKDRCV NNKGVNMISS KCSTDCDAEV SSSGNNLDED CLSIVENKQL 301: LEKDRNDKET EVCLSSPETT TYAFAKQRHA FAGALAGISV SLCLHPLDTV KTMIQSCRLE EKSLCNTGRS IISERGFSGL YRGIASNIAS SAPISALYTF 401: TYETVKGTLL PLFPKEYCSL AHCLAGGSAS IATSFIFTPS ERIKQQMQVS SHYRNCWTAL VGIIQKGGLL SLYAGWTAVL CRNIPHSIIK FYVYENMKQM 501: VLPSPGPCGE MAQPTTLQTL TCGGLAGSAA AFFTTPFDVV KTRLQTQIPG SRNQHPSVYQ TLQSIRRQEG LRGLYRGLIP RLVMYMSQGA IFFASYEFYK 601: SVLSLAAAQP NTSALSGTKQ KMEIALNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)