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AT4G09750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21311031 (2011): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G09750-MONOMEReggNOG:COG1028eggNOG:KOG1208EMBL:AK227433
EMBL:AL049482EMBL:AL161515EMBL:CP002687EnsemblPlants:AT4G09750
EnsemblPlants:AT4G09750.1entrez:826563Gene3D:3.40.50.720GeneID:826563
GO:GO:0016491Gramene:AT4G09750.1hmmpanther:PTHR24320hmmpanther:PTHR24320:SF70
InterPro:IPR002347InterPro:IPR016040KEGG:ath:AT4G09750OMA:HVHIVDM
Pfam:PF00106PhylomeDB:Q9SZ91PIR:T04022PRINTS:PR00081
Proteomes:UP000006548RefSeq:NP_192713.1SMR:Q9SZ91STRING:3702.AT4G09750.1
SUPFAM:SSF51735TAIR:AT4G09750UniGene:At.27989UniGene:At.33676
UniProt:Q9SZ91
Coordinates (TAIR10) chr4:+:6146770..6148698
Molecular Weight (calculated) 35160.90 Da
IEP (calculated) 8.42
GRAVY (calculated) -0.22
Length 322 amino acids
Sequence (TAIR10)
(BLAST)
001: MFLLKTWRST AFGVYGYMNF TKSGFLDHSK KFKPEDMQLQ IEGKNCVVTG ANSGIGFAAA EGLASRGATV YMVCRNKERG QEALSKIQTS TGNQNVYLEV
101: CDLSSVNEIK SFASSFASKD VPVHVLVNNA GLLENKRTTT PEGFELSFAV NVLGTYTMTE LMLPLLEKAT PDAKVITVAS GGMYTSPLTT DLQFSGEKFD
201: GVEQYARNKR IQVALTEKWA DKYKNKGIGF YSMHPGWAET PGVAKSLPSF SESFAGKLRT SEQGADTIVW LALQPKEKLV SGAFYFDRAE APKHLKLAGT
301: SKSHDLIDSV IDSVHSMAAL NP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)