AT4G08930.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.667 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : APR-like 6 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
APR-like 6 (APRL6); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: APR-like 4 (TAIR:AT1G34780.1); Has 764 Blast hits to 754 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 387; Fungi - 76; Plants - 204; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:5729511..5730724 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 33403.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.92 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 295 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEKKLTLLLL VVVVLFVNLT NATVRVQICP RESAKDYILG FRDKSALHRP GFVTEGDDRW LQMAADMVDK KNKCDYAALL FYASWCPFSR LVRPSFDLMS 101: LLYSSVPHFA IEESSVKAST LSKYGVHGFP TIILMNSTML VVYRGSRTLD SLVAFYTDVT GIETMDERWV ERNRLVPHFH AEPENCPFPW ARRSPENLLR 201: QETYLTLATV FVLLRLLHLI SPTMVVFVKF TWGRVSNMRL GNPLEHTVTM YLKEPCMSSN LQEGAMNARA WASKSLATVS IAESSSSSRS VSASQ |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)