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AT4G08930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.667
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : APR-like 6
Curator
Summary (TAIR10)
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
Computational
Description (TAIR10)
APR-like 6 (APRL6); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: APR-like 4 (TAIR:AT1G34780.1); Has 764 Blast hits to 754 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 387; Fungi - 76; Plants - 204; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111M6ZeggNOG:KOG2640EMBL:AF128396EMBL:AK227730
EMBL:AL161513EMBL:BX826634EMBL:CP002687EnsemblPlants:AT4G08930
EnsemblPlants:AT4G08930.1entrez:826471Gene3D:3.40.30.10GeneID:826471
Genevisible:Q9ZPE9GO:GO:0003756GO:GO:0005623GO:GO:0006457
GO:GO:0016021GO:GO:0034976GO:GO:0045454Gramene:AT4G08930.1
hmmpanther:PTHR18929hmmpanther:PTHR18929:SF113HOGENOM:HOG000239500InterPro:IPR012336
InterPro:IPR013766iPTMnet:Q9ZPE9KEGG:ath:AT4G08930OMA:ILMNSTM
PaxDb:Q9ZPE9Pfam:PF00085Pfam:Q9ZPE9PhylomeDB:Q9ZPE9
PIR:A85090PRO:PR:Q9ZPE9ProteinModelPortal:Q9ZPE9Proteomes:UP000006548
RefSeq:NP_192632.2SMR:Q9ZPE9SUPFAM:SSF52833TAIR:AT4G08930
tair10-symbols:APRL6tair10-symbols:ATAPRL6TMHMM:TMhelixUniGene:At.33721
UniProt:Q9ZPE9
Coordinates (TAIR10) chr4:+:5729511..5730724
Molecular Weight (calculated) 33403.60 Da
IEP (calculated) 8.92
GRAVY (calculated) 0.04
Length 295 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKLTLLLL VVVVLFVNLT NATVRVQICP RESAKDYILG FRDKSALHRP GFVTEGDDRW LQMAADMVDK KNKCDYAALL FYASWCPFSR LVRPSFDLMS
101: LLYSSVPHFA IEESSVKAST LSKYGVHGFP TIILMNSTML VVYRGSRTLD SLVAFYTDVT GIETMDERWV ERNRLVPHFH AEPENCPFPW ARRSPENLLR
201: QETYLTLATV FVLLRLLHLI SPTMVVFVKF TWGRVSNMRL GNPLEHTVTM YLKEPCMSSN LQEGAMNARA WASKSLATVS IAESSSSSRS VSASQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)