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AT4G07990.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG8AeggNOG:ENOG4112BMJEMBL:CP002687EnsemblPlants:AT4G07990
EnsemblPlants:AT4G07990.1entrez:826304ExpressionAtlas:F4JG06Gene3D:1.10.287.110
GeneID:826304Gramene:AT4G07990.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF272
InParanoid:F4JG06InterPro:IPR001623ncoils:CoilOMA:TQQRIRH
PaxDb:F4JG06Pfam:PF00226Pfscan:PS50076PRIDE:F4JG06
PRINTS:PR00625PROSITE:PS50076ProteinModelPortal:F4JG06Proteomes:UP000006548
RefSeq:NP_567329.2SMART:SM00271SMR:F4JG06SUPFAM:SSF46565
TAIR:AT4G07990UniGene:At.43102UniProt:F4JG06
Coordinates (TAIR10) chr4:-:4825650..4828937
Molecular Weight (calculated) 27783.20 Da
IEP (calculated) 9.83
GRAVY (calculated) -1.33
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGEDDKDKK WNPPPPQQKP DSRPWEVLAA FVICATATTF AVHQLRRNFD WVYTQLTRTP SAGRGTFRTS FQEEAWRRYN KRMQEEYEDE LERVARIRRM
101: QSVFNRERNK FRRGYENWTE NDPGAQQYHQ QFQRHDWYWK TESSHRNQRT NHQEPSDQRR VYPLSHHYSV LGLSRSRATP YTEAEIKKAF REKALEFHPD
201: QNQDNKIVAE AKFKEVLLSY EAIKQEIKEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)