AT4G12230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1478 Blast hits to 1473 proteins in 564 species: Archae - 10; Bacteria - 1101; Metazoa - 104; Fungi - 4; Plants - 47; Viruses - 3; Other Eukaryotes - 209 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7284645..7287348 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43549.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||
| Length | 392 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKGVSSTPGD YVYFKSQVPL HKIPIGTKQW RYYDFGPKTV PPLICIPGIA GTADVYYKQI MALSMKGYRV ISVDIPRVWN YHEWIQAFEK FLDTIDVHHV 101: HLYGTSLGGF LAQLFAHHRP RRVKSLVLSN TYLDTRTFAT AMPWAPFVSW TPSFLLKRYV LTGIRDGPHE PFIADSVDFA VSQVETLSKD DLASRLTLTV 201: DAASVGSLLL SDSSVTIMDT NDYCAIPQHL KDELTERYPE ARRAYLKSGG DFPFLSRPDE VNLHLQLHLR RVGVEPRPEV VKSIPKGGAD GTDGSSQSKK 301: KSDEEKDDRN NNMPQDSGSS SSDQSPTFPE SSGSSNDPPL PTDTIQLLSS SLNNLILVQL AGEVYQSCVV FTLCYCTLVL VHGGGFISRQ LV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)