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AT4G00740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
BioGrid:13311EC:2.1.1.-eggNOG:ENOG410IHPDeggNOG:ENOG410XP0D
EMBL:AF128392EMBL:AL161472EMBL:AY059835EMBL:AY059913
EMBL:BT000151EMBL:BT008377EMBL:CP002687EnsemblPlants:AT4G00740
EnsemblPlants:AT4G00740.1entrez:828020Gene3D:3.40.50.150GeneID:828020
Genevisible:Q93W95GO:GO:0000139GO:GO:0005768GO:GO:0005794
GO:GO:0005802GO:GO:0008757GO:GO:0016020GO:GO:0016021
GO:GO:0052546Gramene:AT4G00740.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF763
HOGENOM:HOG000238541InParanoid:Q93W95InterPro:IPR004159InterPro:IPR029063
iPTMnet:Q93W95KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-
KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-
KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT4G00740
OMA:KSRCDLFPaxDb:Q93W95Pfam:PF03141Pfam:Q93W95
PhylomeDB:Q93W95PIR:B85010PRIDE:Q93W95PRO:PR:Q93W95
ProteinModelPortal:Q93W95Proteomes:UP000006548RefSeq:NP_567184.1STRING:3702.AT4G00740.1
SUPFAM:SSF53335SwissPalm:Q93W95TAIR:AT4G00740TMHMM:TMhelix
UniGene:At.23439UniProt:Q93W95
Coordinates (TAIR10) chr4:-:307815..310298
Molecular Weight (calculated) 67558.80 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.21
Length 600 amino acids
Sequence (TAIR10)
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)