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AT4G00590.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.932
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 3104 Blast hits to 3030 proteins in 885 species: Archae - 117; Bacteria - 1482; Metazoa - 502; Fungi - 255; Plants - 169; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G00590-MONOMEREC:3.4.25.-eggNOG:COG1446eggNOG:KOG1592
EMBL:AF058919EMBL:AL161472EMBL:BX827980EMBL:CP002687
EnsemblPlants:AT4G00590EnsemblPlants:AT4G00590.1entrez:827968ExpressionAtlas:O65268
GeneID:827968Genevisible:O65268GO:GO:0004298gramene_pathway:3.5.1.1
gramene_pathway:ASPARAGINE-DEG1-PWYgramene_plant_reactome:1119393gramene_plant_reactome:6876473hmmpanther:PTHR10188
hmmpanther:PTHR10188:SF8HOGENOM:HOG000286029InParanoid:O65268InterPro:IPR000246
InterPro:IPR029055MEROPS:T02.004OMA:HFEARIDPANTHER:PTHR10188
PaxDb:O65268Pfam:O65268Pfam:PF01112PIR:T01223
PRIDE:O65268PRO:PR:O65268ProteinModelPortal:O65268Proteomes:UP000006548
RefSeq:NP_191968.3SMR:O65268SUPFAM:SSF56235TAIR:AT4G00590
UniGene:At.44020UniProt:O65268
Coordinates (TAIR10) chr4:+:252835..254880
Molecular Weight (calculated) 42628.90 Da
IEP (calculated) 6.39
GRAVY (calculated) -0.01
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MMAGDGADQS RRFFVAVHVG AGYHAAANEK ALRSVMRRAC LAASTILRQD SGECIDAVSA AIQVLEDDPS TNAGRGSNLT EDGHVECDAS LMDGDSGMFG
101: GVGAVPGVRN AIKIAALLVK EQITGSTLLG RIPPMLLVGE GARRWGKSKS VLIPGTVTEA DQWLVTERAR NQWRRFKAML SEVGAKSILS AEEHPRGTEN
201: NETCEENVSS CAAADEDKIM DTVGVICVDN EGHIACGSSS GGIAMKISGR VGLAATYGSG CWASSKGPFG APFLVGCCVS GAGEYLMRGF AARECCTSLA
301: LSQAGPASAA MKVLRSVMHQ ESSKIGTADK TAGILVVQAD ASVVVPGSKP ELNAVEIAAA YSSLSFGVGY YGNSIEKPKI SILRTRRQMS EAGVDHFEAR
401: IDLRPTCC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)