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AT5G64360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EnsemblPlants:AT5G64360EnsemblPlants:AT5G64360.1entrez:836557
ExpressionAtlas:F4KDM3Gene3D:1.10.287.110GeneID:836557Gramene:AT5G64360.1
hmmpanther:PTHR24078hmmpanther:PTHR24078:SF316InterPro:IPR001623Pfam:PF00226
Pfscan:PS50076PhylomeDB:F4KDM3PRIDE:F4KDM3PROSITE:PS50076
ProteinModelPortal:F4KDM3Proteomes:UP000006548RefSeq:NP_851264.2SMART:SM00271
SMR:F4KDM3SUPFAM:SSF46565TAIR:AT5G64360UniGene:At.28961
UniGene:At.75346UniProt:F4KDM3
Coordinates (TAIR10) chr5:-:25737208..25738602
Molecular Weight (calculated) 45864.00 Da
IEP (calculated) 5.34
GRAVY (calculated) -0.35
Length 422 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG KETYVRSNKK
301: HGVEEVQNVE SISSASNHAV SIASNAAAVG SSTGVMSKPG SYITRKRMGT GAKNLGRLDL NVEFSNEVEE PGVAGGGNAG NGIGSNREVD NMEGIGFFEG
401: LDEFLNSLPI LSVVGDDKIK AT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)