AT4G00030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plastid-lipid associated protein PAP / fibrillin family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13565..14366 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24069.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.83 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||
| Length | 212 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALALSLSAC SPPLRRTRRA GFRTSCSIFA NPAQRAKRKL LELISEEDRG LRTQKDPKKR DEIVNAIESM TVIGRSSITT DDSLSATWRL LWTTEKEQLF 101: IIEKAGLFGT TAGDVLQVID VNKRILNNVI TFPPDGVFFV RSDIDIASPQ RVNFRFNSAV LRGKNWELPL PPFGKGWFEN VYMDGEIRVA KDIRGDYLIV 201: DRAPYNWTES FV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)