AT3G62750.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.986 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : beta glucosidase 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
beta glucosidase 8 (BGLU8); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 7 (TAIR:AT3G62740.1); Has 11295 Blast hits to 10975 proteins in 1475 species: Archae - 142; Bacteria - 7812; Metazoa - 710; Fungi - 200; Plants - 1441; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr3:+:23214375..23216900 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56181.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 497 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKHFNLLSII LVIVLATSYI DAFTRNDFPE DFLFGAGTSA YQWEGAANED GRTPSVWDTT SHCYNGSNGD IACDGYHKYK EDVKLMAEMG LESFRFSISW 101: SRLIPNGRGR INPKGLLFYK NLIKELRSHG IEPHVTLYHY DLPQSLEDEY GGWINHKIIE DFTAFADVCF REFGEDVKLW TTINEATIFA FAFYGKDVRY 201: GNCTTGNYCM ETYIAGHNML LAHASASNLY KLKYKSKQRG SIGLSIFALG LTPYTNSKDD EIATQRAKAF LYGWMLKPLV FGDYPDEMKR TLGSRLPVFS 301: EEESEQVKGS SDFVGIIHYT TVYVTNQPAP YIFPSSTNKD FFTDMGAYII STGNSSSFVF DAVPWGLEGV LQHIKHRYNN PPIYILENGS PMKHDSMLQD 401: TPRVEYIQAY IGAVLNAIKS GSDTRGYFVW SLIDLFEVQV GYKSSFGMYY VNFSDPGRKR SPKLSASWYT GFLNGTIDVA SQDMTQLQRN FSGSSSL |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)