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AT3G60550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.522
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cyclin p3;2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink).
Protein Annotations
BioGrid:10540eggNOG:ENOG4111TTKeggNOG:KOG1674EMBL:AL138646
EMBL:BT012357EMBL:CP002686EnsemblPlants:AT3G60550EnsemblPlants:AT3G60550.1
entrez:825226Gene3D:1.10.472.10GeneID:825226Genevisible:Q9M205
GO:GO:0000079GO:GO:0007049GO:GO:0051301Gramene:AT3G60550.1
hmmpanther:PTHR15615hmmpanther:PTHR15615:SF15HOGENOM:HOG000239309InParanoid:Q9M205
IntAct:Q9M205InterPro:IPR012389InterPro:IPR013763InterPro:IPR013922
KEGG:ath:AT3G60550OMA:TRNERISPaxDb:Q9M205Pfam:PF08613
Pfam:Q9M205PhylomeDB:Q9M205PIR:T47866PIRSF:PIRSF027110
PRIDE:Q9M205PRO:PR:Q9M205ProteinModelPortal:Q9M205Proteomes:UP000006548
RefSeq:NP_191614.1SMR:Q9M205STRING:3702.AT3G60550.1SUPFAM:SSF47954
TAIR:AT3G60550tair10-symbols:CYCP3;2UniGene:At.50295UniProt:Q9M205
Coordinates (TAIR10) chr3:+:22379846..22380641
Molecular Weight (calculated) 26463.00 Da
IEP (calculated) 9.42
GRAVY (calculated) -0.20
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSNSLTIS PRKLRSDLYS YSYQNNSKTP LVISVLSSLI DRTLTRNERI SRRALPSSGA GGKTQIFDCR EIPDMTIQSY LGRIFRYTKA GPSVYVVAYV
101: YIDRFCQTNP GFRISLTNVH RLLITTIMIA SKYVEDLNYR NSYFAKVGGL ETEDLNKLEL EFLFLMGFKL HVNVSVFESY CCHLEREVSF GGGYQIEKAL
201: RCAEEIKSRQ MIIQDPKHHH HHHQLARILL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)