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AT3G59840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IPGTeggNOG:ENOG410Y3MAEMBL:AK175970EMBL:AY065151
EMBL:AY081597EMBL:AY085682EMBL:CP002686EnsemblPlants:AT3G59840
EnsemblPlants:AT3G59840.1entrez:825153GeneID:825153GO:GO:0009507
GO:GO:0009536GO:GO:0009941Gramene:AT3G59840.1HOGENOM:HOG000241517
IntAct:Q8VZ93KEGG:ath:AT3G59840OMA:FSWWRGSPhylomeDB:Q8VZ93
Proteomes:UP000006548RefSeq:NP_567086.1STRING:3702.AT3G59840.1TAIR:AT3G59840
UniGene:At.28578UniProt:Q8VZ93
Coordinates (TAIR10) chr3:-:22105853..22106146
Molecular Weight (calculated) 10500.50 Da
IEP (calculated) 4.39
GRAVY (calculated) -0.31
Length 97 amino acids
Sequence (TAIR10)
(BLAST)
1: MGILSWFTGS PKPSQSETSK PEMIQMPKSE TPAPGMNGAI EVPRPDRATV FEFGSVAATG DRVTLAGYCP VSDDLEPCRW EILPADGKDA PQFRVVF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)