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AT1G04070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31023727 (2019): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:27943495 (2017): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : translocase of outer membrane 22-I
Curator
Summary (TAIR10)
Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion.
Computational
Description (TAIR10)
translocase of outer membrane 22-I (TOM22-I); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial outer membrane translocase complex, subunit Tom22, plant (InterPro:IPR017411); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 22-V (TAIR:AT5G43970.1); Has 73 Blast hits to 73 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41122K3eggNOG:KOG4111EMBL:BT025570EnsemblPlants:AT1G04070
EnsemblPlants:AT1G04070.1entrez:839317ExpressionAtlas:Q1H594GeneID:839317
GO:GO:0016021Gramene:AT1G04070.1hmmpanther:PTHR12504InterPro:IPR017411
KEGG:ath:AT1G04070PaxDb:Q1H594Pfam:O64497PhylomeDB:Q1H594
PIRSF:PIRSF038151PRIDE:O64497PRIDE:Q1H594RefSeq:NP_563699.1
STRING:3702.AT1G04070.1TAIR:AT1G04070tair10-symbols:ATTOM22-Itair10-symbols:TOM22-I
TMHMM:TMhelixUniGene:At.43658UniProt:O64497UniProt:Q1H594
Coordinates (TAIR10) chr1:-:1050832..1051116
Molecular Weight (calculated) 9940.24 Da
IEP (calculated) 9.17
GRAVY (calculated) 0.22
Length 94 amino acids
Sequence (TAIR10)
(BLAST)
1: MAPKKIGAGK GDSSILAKIS NYDIVSQGRR AACDAVYVSK KLLKSTGKAA WIAGTTFLIL AVPLILELEQ DHRLGEIDFE QASLLGTPPV GAML
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)