AT3G59340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.506 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Eukaryotic protein of unknown function (DUF914) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59310.1); Has 1089 Blast hits to 1084 proteins in 305 species: Archae - 7; Bacteria - 346; Metazoa - 190; Fungi - 138; Plants - 133; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21928971..21931030 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37322.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.14 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.43 | ||||||||||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAMGFDFNEM NKTKKTLIGL GLGQILSLLC TSNAFTSSEL ARKGINAPTS QTFLSYTLLA VVYGGIMLYR RPTIKGKWYH YFLLALVDVE GNFLVVKANQ 101: YTSITSIMLL DCWAIPCVLV LTWMFLKTKY RLMKISGVFI CIAGVVMVLF SDVHAGSRAG GSNPVKGDFL VLAGATLYAV SNTTEEFLVK NADTVELMTF 201: MGLFGAIISA IQVAIFEQGE LKAIHWSADA VFPFLRFAIT MFLFYSLLPI LLRTNGSTMF TLSLLTSDMW AVLIRIFAYH EKVDWLYYLA FATTAIGLII 301: YSMKEKDEEE EREEQRKKLL DEEEGQSLPD TSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)