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AT3G59330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.938
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic protein of unknown function (DUF914)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 389 Blast hits to 389 proteins in 130 species: Archae - 0; Bacteria - 16; Metazoa - 119; Fungi - 92; Plants - 118; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0697eggNOG:KOG2766EMBL:CP002686EnsemblPlants:AT3G59330
EnsemblPlants:AT3G59330.1entrez:825102GeneID:825102GO:GO:0006810
GO:GO:0016021Gramene:AT3G59330.1hmmpanther:PTHR14233hmmpanther:PTHR14233:SF14
InParanoid:F4J893InterPro:IPR009262KEGG:ath:AT3G59330OMA:FKHSHEL
PaxDb:F4J893Pfam:PF06027ProteinModelPortal:F4J893Proteomes:UP000006548
RefSeq:NP_191492.2STRING:3702.AT3G59330.1SUPFAM:0043518TAIR:AT3G59330
TMHMM:TMhelixUniGene:At.34639UniProt:F4J893
Coordinates (TAIR10) chr3:-:21926984..21928332
Molecular Weight (calculated) 27596.10 Da
IEP (calculated) 9.66
GRAVY (calculated) 0.66
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MVYFNFNRIK TKKTLIGFGL GQILSLLSTS LSFTSSEIAR KDFSFFFFSN HPIFKHSHEL TKFEIFIGIN APTSQSFLGY VLLAIVYGAK WYHYLLLAFV
101: DVEANFLVVK AYQNTSMTSV MLLDCWAIPC VLVFTWVFLK TKYRLMKISG VVICNVGVVM VVFSDVHAGD RAGGSNPIKG DFLVIAGATL YAVSNVSQEF
201: LVKNADRVQL MSLLGLFGAI IGAIQISIFV GFLFEPPYNV RSSIVARS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)