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AT3G59320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.692
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic protein of unknown function (DUF914)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic protein of unknown function (DUF914); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 1374 Blast hits to 1372 proteins in 398 species: Archae - 11; Bacteria - 548; Metazoa - 267; Fungi - 110; Plants - 130; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0697eggNOG:KOG2766EMBL:AB060645EMBL:BT028937
EMBL:CP002686EnsemblPlants:AT3G59320EnsemblPlants:AT3G59320.1entrez:825101
ExpressionAtlas:Q948Q8GeneID:825101GO:GO:0006810GO:GO:0016021
Gramene:AT3G59320.1hmmpanther:PTHR14233hmmpanther:PTHR14233:SF4InterPro:IPR009262
KEGG:ath:AT3G59320KO:K15287OMA:HINDKCHPfam:PF06027
PhylomeDB:Q948Q8Proteomes:UP000006548RefSeq:NP_191491.2STRING:3702.AT3G59320.1
SUPFAM:0043518TAIR:AT3G59320TMHMM:TMhelixUniGene:At.27055
UniProt:Q948Q8
Coordinates (TAIR10) chr3:-:21924705..21926840
Molecular Weight (calculated) 37498.30 Da
IEP (calculated) 6.52
GRAVY (calculated) 0.59
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MVCFNFNEMK TKKTLIGLGL GQIISLLSTL IASIASEIAR KGISAPTSQT FLGYVSLAIV YGGIMLYRRS AIKVKWYHYF LLAVVDVEAN FLVVKAFQNT
101: SMTSIMLLDC WAIPCVLVLT WVFLKTRYRL MKISGVVICI VGVVMVVFSD VHAGDRAGGS NPVKGDFLVI AGATLYAVSN VTEEFLVKNA DVTELMAFLG
201: LFGAIIAAIQ ISIFERGAVR AIQWSTEAIL LYIGGALGLF LFYTLITILI KNNGSTMFNL SLLTSDMWAI LIRTFGYHEK VDWLYFLAFA TTATGLIIYS
301: MKEKDEEEQR SGEVVSERRK LFDEEDGDSL HSNLIDAST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)