AT3G57760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.980 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57740.1); Has 17537 Blast hits to 17320 proteins in 305 species: Archae - 0; Bacteria - 8; Metazoa - 285; Fungi - 19; Plants - 17140; Viruses - 4; Other Eukaryotes - 81 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21395983..21397119 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43086.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.88 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 378 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDWLRTKRIR AKKRKRNVKE NGEVVLKELI ECCDGKCNPI KNFSYDQIIK ATNNFCQSNR ASRIDVYYRC YKGMLDDRPV LIKKGKYTLD MKEICRDIAI 101: SSMVSGHKNF LKLLGCCLEF TPPVLVFEYA EVITLGPLLT SHPGYLRRIK IAREVANALT YLHTAFSRVF IHSNLDPFTI FLDGNGVAKL GNFCNCITIP 201: EGETFVHDDT LQKYHELRHN TLKGTHGLGV CNLPVIDPDY KSTGKVTTKT DMHSFGGFML ALVQIREVDD ELSLSSDMLR ALADLFIKPY DDVRYVHFPL 301: HHHVSKILRK FGYAEVVDSD MSEVAAWPIK AFLRLALRCI GCKLGDPLSS MIQVTKELRL IEKSAYYPSN NRSQMSSI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)