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AT3G57750.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 51261 Blast hits to 50836 proteins in 2124 species: Archae - 20; Bacteria - 5135; Metazoa - 13711; Fungi - 2551; Plants - 24631; Viruses - 129; Other Eukaryotes - 5084 (source: NCBI BLink).
Protein Annotations
DNASU:824944eggNOG:COG0515eggNOG:KOG1187EMBL:AK175119
EMBL:AL049660EMBL:AY084360EMBL:CP002686EnsemblPlants:AT3G57750
EnsemblPlants:AT3G57750.1EnsemblPlants:AT3G57750.2entrez:824944GeneID:824944
Genevisible:Q8LGB6GO:GO:0004672GO:GO:0005524GO:GO:0006952
Gramene:AT3G57750.1Gramene:AT3G57750.2hmmpanther:PTHR27005hmmpanther:PTHR27005:SF38
InParanoid:Q8LGB6InterPro:IPR000719InterPro:IPR011009KEGG:ath:AT3G57750
OMA:IISSWGYPaxDb:Q8LGB6Pfam:PF00069Pfscan:PS50011
PIR:T06745PRIDE:Q8LGB6PRO:PR:Q8LGB6PROSITE:PS50011
ProteinModelPortal:Q8LGB6Proteomes:UP000006548RefSeq:NP_001030878.1RefSeq:NP_567053.1
SMR:Q8LGB6STRING:3702.AT3G57750.1SUPFAM:SSF56112TAIR:AT3G57750
TMHMM:TMhelixUniGene:At.3180UniProt:Q8LGB6
Coordinates (TAIR10) chr3:+:21394050..21395054
Molecular Weight (calculated) 37958.50 Da
IEP (calculated) 5.32
GRAVY (calculated) -0.20
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKNNKKKRR WDLKNGGILL EELIASFDGK TNPIRCFSSD QILKATDNFS ESRIISSWGY FIWYKGVIEE RQVSIKKWSS QNLSSFTEAY RDISVSSQMS
101: GHKNALKLIG CCLEFDLPAL VCEYTEHGPL NRDGGLSSGV VLPWKVRLKI AKEIASSVTY LHTAFPETIV HRNINPTNIF IDENWTAKLS DFWFCVAIPE
201: GELYVEDDVK GVIGFVDPDY YWTMKVTEKV DIYSFGVVML VLLSGRAAVF NGPDEAPMSL NDHVSEVMEK GEFDEIVDKE IWNDLGGDDD LVLRRSQVKA
301: FLRLALRCVR YKKEDPVSGM LEVAKELKLI EKLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)