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AT2G25190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.763
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PPPDE putative thiol peptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31980.1); Has 848 Blast hits to 846 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 77; Plants - 355; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111H3ZeggNOG:KOG0324EMBL:AC007070EMBL:AF370476
EMBL:AY081691EMBL:AY085239EMBL:CP002685EnsemblPlants:AT2G25190
EnsemblPlants:AT2G25190.1entrez:817057GeneID:817057Gramene:AT2G25190.1
hmmpanther:PTHR12378hmmpanther:PTHR12378:SF12HOGENOM:HOG000241907InterPro:IPR008580
KEGG:00261+3.4.-.-KEGG:00310+3.4.-.-KEGG:00550+3.4.-.-KEGG:00780+3.4.-.-
KEGG:ath:AT2G25190MEROPS:C97.A08OMA:AFGAHESPfam:PF05903
PhylomeDB:O81728PIR:D84645Proteomes:UP000006548RefSeq:NP_565588.1
SMART:SM01179SMR:O81728TAIR:AT2G25190UniGene:At.14335
UniProt:O81728
Coordinates (TAIR10) chr2:+:10734187..10735426
Molecular Weight (calculated) 26699.00 Da
IEP (calculated) 10.55
GRAVY (calculated) -0.60
Length 240 amino acids
Sequence (TAIR10)
(BLAST)
001: MLCFKGSVKR KKQSGSVPVY LNVYDLTPMN AYGYWLGLGV FHSGVEVHGV EYAFGAHESS STGIFEVEPK KCPGFTFRKS ILVGKTDLVA KEVRVFMEKL
101: AEEYQGNKYH LITRNCNHFC NEVCLKLAQK SIPRWVNRLA RLGVLCNCVL PPRLNEAKVR RVGKGELSES EKKKLRNRSR SDPLLSSSPS SSTPDNHRSH
201: IRAKSSGNHP SSSSSSSSGS KKNRRPKAQD QKSPSVSIKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)