AT3G55710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G55700.1); Has 7655 Blast hits to 7604 proteins in 455 species: Archae - 0; Bacteria - 332; Metazoa - 2135; Fungi - 27; Plants - 4985; Viruses - 116; Other Eukaryotes - 60 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:20673847..20675811 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52138.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.24 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||
| Length | 464 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEERKVKRII MFPLPFTGHF NPMIELAGIF HNRGFSVTIL HTSFNFPDPS RHPQFTFRTI THKNEGEEDP LSQSETSSGK DLVVLISLLK QYYTEPSLAE 101: EVGEGGTVCC LVSDALWGRN TEIVAKEIGV CTMVMRTSGA ATFCAYTAFP LLIDKGYLPI QGSRLDELVT ELPPLKVKDL PVIKTKEPEG LNRILNDMVE 201: GAKLSSGVVW NTFEDLERHS LMDCRSKLQV PLFPIGPFHK HRTDLPPKPK NKDKDDDEIL TDWLNKQAPQ SVVYVSFGSL AAIEENEFFE IAWGLRNSEL 301: PFLWVVRPGM VRGTEWLESL PCGFLENIGH QGKIVKWVNQ LETLAHPAVG AFWTHCGWNS TIESICEGVP MICTPCFSDQ HVNARYIVDV WRVGMMLERC 401: KMERTEIEKV VTSVMMENGA GLTEMCLELK EKANVCLSED GSSSKYLDKL VSHVLSFDSS AFAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)