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AT2G38995.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-acyltransferase (WSD1-like) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G37300.1); Has 952 Blast hits to 940 proteins in 139 species: Archae - 2; Bacteria - 706; Metazoa - 10; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2IPeggNOG:ENOG410ZXQWEMBL:CP002685EnsemblPlants:AT2G38995
EnsemblPlants:AT2G38995.1entrez:818485ExpressionAtlas:F4IU13GeneID:818485
GO:GO:0004144GO:GO:0016021GO:GO:0045017Gramene:AT2G38995.1
hmmpanther:PTHR31650hmmpanther:PTHR31650:SF1InParanoid:F4IU13InterPro:IPR004255
InterPro:IPR009721KEGG:00073+2.3.1.20KEGG:00561+2.3.1.20OMA:CFMRDTK
PaxDb:F4IU13Pfam:PF03007Pfam:PF06974PRIDE:F4IU13
ProteinModelPortal:F4IU13Proteomes:UP000006548RefSeq:NP_850307.2SUPFAM:SSF52777
TAIR:AT2G38995TMHMM:TMhelixUniGene:At.46968unipathway:UPA00282
UniProt:F4IU13
Coordinates (TAIR10) chr2:+:16282139..16284700
Molecular Weight (calculated) 55327.90 Da
IEP (calculated) 9.52
GRAVY (calculated) -0.06
Length 488 amino acids
Sequence (TAIR10)
(BLAST)
001: MYTMKKGKDM AKEEQETAAI EPLSPVSQLF VSPSLYCFII FTLGFQTRCN PSTIVEGVKN TWIKLPRFSS KVEIKKNGKA SWVPVSVRVE DHVVVPDLDY
101: SNIENPDQFI EDYTSKLANT PMDMSRPLWE LHLLNIKTSN AESLAIGKFH HSLGDGMSLI SLLLASSRKT SDPDALPTTA ATRKHASSNK KSWWLVGRFW
201: FMIRIIFTTV VELFKYLLTL CFMRDTKTPL MGKTGDAIRS RKVIHRIVSF DDVKLVKNNM DMKVNDVLLG MTQAGLSRYL SRKYVDEDMV VEKKKNLEKI
301: RLRGTVFVNL RADTKLEDLA NMMAKGSKCR WGNFVGVIIF PLWVRSEDDP LEYVRRAKST MDIKKLSIES LICYGLIKLT RKILGGKVVE TLVRRLFDHT
401: TLTFSNVMGP DEDISFFDHP MSYVAASALG GPQALIIHYV TYVNKIVINL AVDTSVIRDP HLLCDDLVES LDIIKLAAME KGVHKMEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)