AT1G63710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.818 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 86, subfamily A, polypeptide 7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at highest level in mature stems and flowers. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 86, subfamily A, polypeptide 7 (CYP86A7); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 8 (TAIR:AT2G45970.1); Has 27788 Blast hits to 27686 proteins in 1473 species: Archae - 44; Bacteria - 2292; Metazoa - 10498; Fungi - 6108; Plants - 7911; Viruses - 3; Other Eukaryotes - 932 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:23632360..23633931 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60355.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.95 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDGSTAAIIL TLIVTYIIWF VSLRRSYKGP RVWPLVGSLP ALITNAHRMH DFIADNLRMC GGTYQTCIFP IPFLAKKQGH VTVTCDPKNL EHILKTRFDN 101: YPKGPSWQSV FHDLLGDGIF NSDGDTWRFQ RKTAALEFTT RTLRQAMARW VDRAIKNRLV PILESARSRA EPIDLQDVLL RLTFDNICGL TFGKDPRTLS 201: PEFPENGFAV AFDGATEATL QRFIMPEFIW KIRKWLRLGL EDDMSRSISH VDNYLSEIIN TRKLELLGQQ QDESRHDDLL SRFMKKKESY SDKYLKYVAL 301: NFILAGRDTS SVAMSWFFWL VSLNPRVEEK IINEICTILI KTRDTNVSKW TDEPLTFDEI DQLVYLKAAL SETLRLYPSV PEDSKFVVAN DVLPDGTFVP 401: SGSNVTYSIY SVGRMKFIWG EDCLEFKPER WLEESRDEKC NQYKFVAFNA GPRICLGKDL AYLQMKSITA SILLRHRLTV APGHRVEQKM SLTLFMKFGL 501: KMDVHKRDLT LPVEKVVNEM RKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)