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AT3G51960.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine zipper 24
Curator
Summary (TAIR10)
bZIP transcription factor induced by salt stress and promoted salt tolerance. Localized to the cytoplasm and nucleus under control conditions and targeted preferentially to the nucleus under salt stress
Computational
Description (TAIR10)
basic leucine zipper 24 (BZIP24); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 159 Blast hits to 159 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 16; Plants - 135; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU4TeggNOG:ENOG411077JEMBL:AK117629EMBL:AL049711
EMBL:BT005422EMBL:CP002686EnsemblPlants:AT3G51960EnsemblPlants:AT3G51960.1
entrez:824359ExpressionAtlas:Q8GTS1GeneID:824359GO:GO:0003700
GO:GO:0005634GO:GO:0005737GO:GO:0006351GO:GO:0043565
hmmpanther:PTHR23334hmmpanther:PTHR23334:SF25HOGENOM:HOG000131693IntAct:Q8GTS1
InterPro:IPR004827InterPro:IPR031106PANTHER:PTHR23334PaxDb:Q8GTS1
Pfam:PF07716Pfscan:PS50217PhylomeDB:Q8GTS1PIR:T49075
PROSITE:PS50217ProteinModelPortal:Q8GTS1Proteomes:UP000006548RefSeq:NP_850680.1
SMART:SM00338SMR:Q8GTS1STRING:3702.AT3G51960.2SUPFAM:SSF57959
TAIR:AT3G51960tair10-symbols:ATBZIP24tair10-symbols:BZIP24UniGene:At.35339
UniProt:Q8GTS1
Coordinates (TAIR10) chr3:-:19282828..19284064
Molecular Weight (calculated) 26092.70 Da
IEP (calculated) 6.23
GRAVY (calculated) -0.81
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MFCCCKDCRG NQRVSNFDSL TGVFFGDLEF GPQNQRYIKM NEEEDKDQDR VTRGCSHTHS CNPPGPEDAS HSHTCFHAHT HLIISDQQEN DHSDSSNKKR
101: LCGNREAVRK YREKKKARTA YLEDEVMRLQ SLNEQFLRKL QSQEMVETEL IRLRALLVEM QGKIEVELCS FSFQKQCNGS GFVFKEDGCN LATSNMMCEA
201: ARVECEEGQT LHDPIQSFVP QPPPFSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)