AT3G51960.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : basic leucine zipper 24 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
bZIP transcription factor induced by salt stress and promoted salt tolerance. Localized to the cytoplasm and nucleus under control conditions and targeted preferentially to the nucleus under salt stress | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
basic leucine zipper 24 (BZIP24); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 159 Blast hits to 159 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 16; Plants - 135; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:19282828..19284064 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 26092.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.23 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.81 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 227 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MFCCCKDCRG NQRVSNFDSL TGVFFGDLEF GPQNQRYIKM NEEEDKDQDR VTRGCSHTHS CNPPGPEDAS HSHTCFHAHT HLIISDQQEN DHSDSSNKKR 101: LCGNREAVRK YREKKKARTA YLEDEVMRLQ SLNEQFLRKL QSQEMVETEL IRLRALLVEM QGKIEVELCS FSFQKQCNGS GFVFKEDGCN LATSNMMCEA 201: ARVECEEGQT LHDPIQSFVP QPPPFSR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)