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AT3G51800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:20061580 (2010): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15496452 (2005): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : metallopeptidase M24 family protein
Curator
Summary (TAIR10)
putative nuclear DNA-binding protein G2p (AtG2) mRNA,
Computational
Description (TAIR10)
ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1); Has 7405 Blast hits to 7404 proteins in 2313 species: Archae - 229; Bacteria - 4673; Metazoa - 502; Fungi - 534; Plants - 197; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0024eggNOG:KOG2776EMBL:AF049236EMBL:AF360226
EMBL:AF422841EMBL:AK316789EMBL:AV544387EMBL:AY040067
EMBL:AY056616EMBL:AY056617EMBL:AY142627EMBL:CP002686
EMBL:U72503EnsemblPlants:AT3G51800EnsemblPlants:AT3G51800.1EnsemblPlants:AT3G51800.2
EnsemblPlants:AT3G51800.3entrez:824343ExpressionAtlas:Q96327Gene3D:1.10.10.10
Gene3D:3.90.230.10GeneID:824343Genevisible:Q96327GO:GO:0001558
GO:GO:0003723GO:GO:0005634GO:GO:0006364GO:GO:0007275
GO:GO:0009734GO:GO:0030529GO:GO:0044843GO:GO:0051302
hmmpanther:PTHR10804hmmpanther:PTHR10804:SF11HOGENOM:HOG000168207InterPro:IPR000994
InterPro:IPR001714InterPro:IPR004545InterPro:IPR011991iPTMnet:Q96327
KEGG:ath:AT3G51800MEROPS:M24.973OMA:VRDICTQPaxDb:Q96327
Pfam:PF00557Pfam:Q96327PhylomeDB:Q96327PIR:T51151
PRINTS:PR00599PRO:PR:Q96327ProteinModelPortal:Q96327Proteomes:UP000006548
RefSeq:NP_001190060.1RefSeq:NP_190748.1RefSeq:NP_850679.1SMR:Q96327
STRING:3702.AT3G51800.2SUPFAM:SSF46785SUPFAM:SSF55920SwissPalm:Q96327
TAIR:AT3G51800tair10-symbols:ATEBP1tair10-symbols:ATG2tair10-symbols:EBP1
TIGRfam:TIGR00495TIGRFAMs:TIGR00495UniGene:At.10184UniProt:Q96327
Coordinates (TAIR10) chr3:-:19211261..19213568
Molecular Weight (calculated) 42981.50 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.42
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSDDERDEK ELSLTSPEVV TKYKSAAEIV NKALQVVLAE CKPKAKIVDI CEKGDSFIKE QTASMYKNSK KKIERGVAFP TCISVNNTVG HFSPLASDES
101: VLEDGDMVKI DMGCHIDGFI ALVGHTHVLQ EGPLSGRKAD VIAAANTAAD VALRLVRPGK KNTDVTEAIQ KVAAAYDCKI VEGVLSHQLK QHVIDGNKVV
201: LSVSSPETTV DEVEFEENEV YAIDIVASTG DGKPKLLDEK QTTIYKKDES VNYQLKMKAS RFIISEIKQN FPRMPFTARS LEEKRARLGL VECVNHGHLQ
301: PYPVLYEKPG DFVAQIKFTV LLMPNGSDRI TSHTLQELPK KTIEDPEIKG WLALGIKKKK GGGKKKKAQK AGEKGEASTE AEPMDASSNA QE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)