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AT3G50470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.979
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : homolog of RPW8 3
Curator
Summary (TAIR10)
Homolog of RPW8
Computational
Description (TAIR10)
homolog of RPW8 3 (HR3); CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 2 (TAIR:AT3G50460.1); Has 133 Blast hits to 132 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 123; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVBAeggNOG:ENOG4110629EMBL:AF273059EMBL:AK175750
EMBL:AL133363EMBL:CP002686EMBL:KJ634211EnsemblPlants:AT3G50470
EnsemblPlants:AT3G50470.1entrez:824211GeneID:824211GO:GO:0009620
GO:GO:0009626GO:GO:0016021Gramene:AT3G50470.1hmmpanther:PTHR36766
hmmpanther:PTHR36766:SF1HOGENOM:HOG000143526InParanoid:Q9SCS7InterPro:IPR008808
KEGG:ath:AT3G50470ncoils:CoilOMA:DEITRQPPaxDb:Q9SCS7
Pfam:PF05659Pfam:Q9SCS7Pfscan:PS51153PhylomeDB:Q9SCS7
PIR:T46078PRIDE:Q9SCS7PRO:PR:Q9SCS7PROSITE:PS51153
ProteinModelPortal:Q9SCS7Proteomes:UP000006548RefSeq:NP_190616.1STRING:3702.AT3G50470.1
TAIR:AT3G50470tair10-symbols:HR3tair10-symbols:MLA10UniGene:At.51002
UniProt:Q9SCS7
Coordinates (TAIR10) chr3:+:18729146..18730162
Molecular Weight (calculated) 24690.90 Da
IEP (calculated) 8.64
GRAVY (calculated) -0.48
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MPVSEIMAGA ALGLALQVLH DAIKKAKDRS LTTRCILDRL DATIFRITPL VTQVDKLSEE VEDSPRKVIE DLKHLLEKAV SLVEAYAELR RRNLLKKFRY
101: KRRIKELEAS LRWMVDVDVQ VNQWVDIKEL MAKMSEMNTK LDEITRQPTD CICFKSNHST SQSSSQNIVE ETDRSLEEIV ECSSDGSKPK IDIHIHWSSR
201: KRNKDREIRF VLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)