suba logo
AT3G48000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde dehydrogenase 2B4
Curator
Summary (TAIR10)
Encodes a putative (NAD+) aldehyde dehydrogenase.
Computational
Description (TAIR10)
aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G48000-MONOMERBioGrid:9274EC:1.2.1.3eggNOG:COG1012
eggNOG:KOG2450EMBL:AB030820EMBL:AF327426EMBL:AF349447
EMBL:AF349522EMBL:AF372911EMBL:AL049658EMBL:AY090443
EMBL:BT000752EMBL:BT006371EMBL:CP002686EMBL:Z26417
EnsemblPlants:AT3G48000EnsemblPlants:AT3G48000.1entrez:823955Gene3D:3.40.309.10
Gene3D:3.40.605.10GeneID:823955Genevisible:Q9SU63GO:GO:0004029
GO:GO:0005524GO:GO:0005739GO:GO:0005759GO:GO:0009507
GO:GO:0046686Gramene:AT3G48000.1gramene_pathway:1.2.1.27gramene_pathway:1.2.1.3
gramene_pathway:1.2.1.68gramene_pathway:PWY-5168gramene_pathway:PWY66-162gramene_pathway:PWY66-21
gramene_pathway:VALDEG-PWYhmmpanther:PTHR11699hmmpanther:PTHR11699:SF180HOGENOM:HOG000271505
InParanoid:Q9SU63InterPro:IPR015590InterPro:IPR016160InterPro:IPR016161
InterPro:IPR016162InterPro:IPR016163InterPro:IPR029510KEGG:ath:AT3G48000
KO:K00128OMA:HRMIPRIPaxDb:Q9SU63Pfam:PF00171
Pfam:Q9SU63PhylomeDB:Q9SU63PIR:T06683PRIDE:Q9SU63
PRO:PR:Q9SU63PROSITE:PS00070PROSITE:PS00687ProteinModelPortal:Q9SU63
Proteomes:UP000006548Reactome:R-ATH-380612Reactome:R-ATH-5365859Reactome:R-ATH-71384
RefSeq:NP_190383.1scanprosite:PS00070scanprosite:PS00687SMR:Q9SU63
STRING:3702.AT3G48000.1SUPFAM:SSF53720TAIR:AT3G48000tair10-symbols:ALDH2
tair10-symbols:ALDH2Atair10-symbols:ALDH2B4UniGene:At.22890UniProt:Q9SU63
Coordinates (TAIR10) chr3:-:17717082..17719843
Molecular Weight (calculated) 58592.10 Da
IEP (calculated) 7.52
GRAVY (calculated) -0.07
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)