AT3G45750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.949 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotidyltransferase family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1); Has 1473 Blast hits to 1374 proteins in 212 species: Archae - 0; Bacteria - 1; Metazoa - 793; Fungi - 286; Plants - 167; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16793855..16797380 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77239.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.20 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||
| Length | 682 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY 101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL 201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV 301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA 401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG 501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR 601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)