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AT3G45740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : hydrolase family protein / HAD-superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0647eggNOG:KOG1618EMBL:AK229184EMBL:AL157735
EMBL:CP002686EnsemblPlants:AT3G45740EnsemblPlants:AT3G45740.1entrez:823716
Gene3D:3.40.50.1000GeneID:823716GO:GO:0005507GO:GO:0008270
GO:GO:0016787Gramene:AT3G45740.1hmmpanther:PTHR14269hmmpanther:PTHR14269:SF15
HOGENOM:HOG000184411InterPro:IPR006353InterPro:IPR006357InterPro:IPR023214
KEGG:ath:AT3G45740OMA:HENYPHIPfam:PF13242Pfam:PF13344
PhylomeDB:Q9M169PIR:T47514Proteomes:UP000006548RefSeq:NP_190160.1
STRING:3702.AT3G45740.1SUPFAM:SSF56784TAIR:AT3G45740TIGRfam:TIGR01456
TIGRfam:TIGR01460TIGRFAMs:TIGR01456TIGRFAMs:TIGR01460UniGene:At.43663
UniGene:At.66988UniProt:Q9M169
Coordinates (TAIR10) chr3:+:16790830..16793280
Molecular Weight (calculated) 41910.90 Da
IEP (calculated) 7.35
GRAVY (calculated) -0.30
Length 376 amino acids
Sequence (TAIR10)
(BLAST)
001: MNHLLILARN SLRRRNFNLR PPSRSFSSTI SPESNRSSFG IAFDIDGVIL LGSSPVGGSP SALRRLYDDS GALKIPFLFL TNGGGLPESK RASEMSHLLG
101: VQVSPLQVIQ AHSPFRKLVN RFENELVVAA GKGEPAAVMS NYGFKNVISM DEYASYFDNI DPLAPYKKLM FRQDGHKELR SREDVLSQRV QAAFIVSDPV
201: DWSRDIQVLC DILRTGGLPG KEIGPQPHLY IANDDLDYQT EFPTERLGMG AFRIALESIF NRIHEKPLEY TSFGKPNPFV FKNAEDVLKE IATSPYSSNQ
301: GSHHFKTLYM IGDNPKIDIR GARQAGTPWF SILTRTGVFK GKDNHSEFPA DLVVDTVEEA VDFILTRESA KQSLLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)