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AT3G45310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: aleurain-like protease (TAIR:AT5G60360.1); Has 7880 Blast hits to 7821 proteins in 741 species: Archae - 59; Bacteria - 266; Metazoa - 3310; Fungi - 4; Plants - 1865; Viruses - 146; Other Eukaryotes - 2230 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G45310-MONOMERBioCyc:ARA:GQT-1235-MONOMEREC:3.4.22.16eggNOG:COG4870
eggNOG:KOG1543EMBL:AL132953EMBL:AY091771EMBL:CP002686
EnsemblPlants:AT3G45310EnsemblPlants:AT3G45310.1entrez:823669ExpressionAtlas:Q8RWQ9
GeneID:823669Genevisible:Q8RWQ9GO:GO:0005773GO:GO:0008234
hmmpanther:PTHR12411hmmpanther:PTHR12411:SF336HOGENOM:HOG000230774InParanoid:Q8RWQ9
InterPro:IPR000169InterPro:IPR000668InterPro:IPR013128InterPro:IPR013201
InterPro:IPR025660InterPro:IPR025661iPTMnet:Q8RWQ9MEROPS:C01.162
OMA:YSTEEYHPANTHER:PTHR12411PaxDb:Q8RWQ9Pfam:PF00112
Pfam:PF08246Pfam:Q8RWQ9PhylomeDB:Q8RWQ9PIR:T47471
PRIDE:Q8RWQ9PRINTS:PR00705PRO:PR:Q8RWQ9PROSITE:PS00139
PROSITE:PS00639PROSITE:PS00640ProteinModelPortal:Q8RWQ9Proteomes:UP000006548
RefSeq:NP_566880.1scanprosite:PS00139scanprosite:PS00639scanprosite:PS00640
SMART:SM00645SMART:SM00848SMR:Q8RWQ9STRING:3702.AT3G45310.1
SUPFAM:SSF54001TAIR:AT3G45310UniGene:At.25239UniProt:Q8RWQ9
Coordinates (TAIR10) chr3:-:16628704..16630473
Molecular Weight (calculated) 39543.80 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.27
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVKLNLSSS ILLILFAAAA SKEIGFDESN PIKMVSDNLH ELEDTVVQIL GQSRHVLSFS RFTHRYGKKY QSVEEMKLRF SVFKENLDLI RSTNKKGLSY
101: KLSLNQFADL TWQEFQRYKL GAAQNCSATL KGSHKITEAT VPDTKDWRED GIVSPVKEQG HCGSCWTFST TGALEAAYHQ AFGKGISLSE QQLVDCAGTF
201: NNFGCHGGLP SQAFEYIKYN GGLDTEEAYP YTGKDGGCKF SAKNIGVQVR DSVNITLGAE DELKHAVGLV RPVSVAFEVV HEFRFYKKGV FTSNTCGNTP
301: MDVNHAVLAV GYGVEDDVPY WLIKNSWGGE WGDNGYFKME MGKNMCGVAT CSSYPVVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)