AT3G44730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : kinesin-like protein 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
kinesin-like protein 1 (KP1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT2G47500.1); Has 10649 Blast hits to 10123 proteins in 338 species: Archae - 0; Bacteria - 46; Metazoa - 4773; Fungi - 1367; Plants - 1910; Viruses - 0; Other Eukaryotes - 2553 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:16285888..16290852 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 121156.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.68 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1087 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDQGAMETLP EKPSEDEFSL ALRNGLILCN VLNKVNPGSV LKVVENPITP AIQYADGAAQ SAIQYFENMR NFLKAVEDMQ LLTFGASDLE KGGSSNKVVD 0101: CILCLKGFYE WKQAGGVGVW RYGGTVRIVS FNRKGSSPPQ YGIGSESTTD ESVSLDESES SQYDQLLDFL HLSNEISAEE SETAISLAFL FDHFALQLLH 0201: GYLKESDGIN DMPLNEMVID TLLNRVVKDF SAILVSQGAQ LGSFLRKILK CDNGDLSRSE FLAAVFRYLQ HRKDLVSKEF SKFCKCGGKL EFSRLNAREF 0301: SPGHVEAIGL QQKELEEVKS NFVETRSQVK QMQSEWQKEL QRIVHHVKAM EVTSSSYHKV LEENRLLYNE VQDLKGTIRV YCRVRPFFQE QKDMQSTVDY 0401: IGENGNIIIN NPFKQEKDAR KIFSFNKVFG QTVSQEQIYI DTQPVIRSVL DGFNVCIFAY GQTGSGKTYT MSGPDLMTET TWGVNYRALR DLFQLSNART 0501: HVVTYEIGVQ MIEIYNEQVR DLLVSDGSSR RLDIRNNSQL NGLNVPDANL IPVSNTRDVL DLMRIGQKNR AVGATALNER SSRSHSVLTV HVQGKELASG 0601: SILRGCLHLV DLAGSERVEK SEAVGERLKE AQHINKSLSA LGDVIYALAQ KSSHVPYRNS KLTQVLQDSL GGQAKTLMFV HINPEVNAVG ETISTLKFAQ 0701: RVASIELGAA RSNKETGEIR DLKDEISSLK SAMEKKEAEL EQLRSGSIRN TTECQRARAV SPFHLPRTGN GAGTKAEASP QPNDGTRSYE TRSCSTGKQR 0801: KSGFPSALRN REASPRMPNL AEERLNPSPS RRSLSTDRAS TIKSRNKPDV TQNLPVSRTP FPARVPVVKS FSTVPLNPSA ENNHRLHTDN SSEAFQNHQK 0901: LSARKLFPEI EEEHIRHALH IRQGGVKKTR AESSKAKAKQ PSPARFQKLD VGISLRSDAD SEAKVGNYQT QKGNNNHNVI HSRFQNFDVG ISLFSDLCAG 1001: DKSDSTLKSD SSETDNEPPS KSKNAQRNSS KNSLNHKLRT IYAHEDTSLV DDKPSNGTAH IKEGNNNISM PEFRRSRSTH HARFMVP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)