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AT3G27610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotidylyl transferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nucleotidylyl transferase superfamily protein; BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT2G01220.2); Has 420 Blast hits to 413 proteins in 52 species: Archae - 6; Bacteria - 25; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK4ReggNOG:ENOG410Y6Z3EMBL:AK227787EMBL:BT006206
EMBL:CP002686EnsemblPlants:AT3G27610EnsemblPlants:AT3G27610.1entrez:822383
ExpressionAtlas:Q84Q59Gene3D:3.40.50.620GeneID:822383GO:GO:0009058
GO:GO:0016740Gramene:AT3G27610.1hmmpanther:PTHR31285hmmpanther:PTHR31285:SF0
HOGENOM:HOG000265521InterPro:IPR004821InterPro:IPR014729Pfam:PF01467
PhylomeDB:Q84Q59Proteomes:UP000006548RefSeq:NP_189398.1SUPFAM:SSF52374
TAIR:AT3G27610UniGene:At.42930UniProt:Q84Q59
Coordinates (TAIR10) chr3:-:10225729..10228152
Molecular Weight (calculated) 42610.00 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.15
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESAIRTIV ESIHSSPTQA VVYLSGGASQ SLGWLMSVPG ASNTLLEAVV PYSMISMVQL LGRVPNQHCS QSMANEMALL AYNRALKLSK PGCAVLGVGF
101: TGTLATSRPK RGDHRFFLSI RASNRIWETS VTLTKGKRSR EEEDKVASSV LIQAMAKACQ VSETLDSGLT DSEVLNESVI QFSEEEELEQ LIDGQICSKI
201: YPFSKESYGS DKDRKIILPG SFNPLHDGDL KLLEAAMSVS EEGGYPCFEI SALNADKPSL TVTEIKDRVK QFEVLEKTVI VSNQPFFYKK AELFPGSSFV
301: IGADTAARIV NPKYYEGSHK RMLEVLGDCK RTGCKFLVGG RNVDSVFKVL DDHEIPKEIS TMFTSISADT FRMDISSTEL RKNQGGVIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)