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AT3G24420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.637
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7600 Blast hits to 7598 proteins in 1433 species: Archae - 43; Bacteria - 6108; Metazoa - 134; Fungi - 45; Plants - 270; Viruses - 2; Other Eukaryotes - 998 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIUCeggNOG:ENOG410XPCSEMBL:AK229212EMBL:AP000382
EMBL:BT015329EMBL:BT015839EMBL:CP002686EnsemblPlants:AT3G24420
EnsemblPlants:AT3G24420.1entrez:822032ESTHER:arath-Q9LK01Gene3D:3.40.50.1820
GeneID:822032GO:GO:0016787Gramene:AT3G24420.1hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF841HOGENOM:HOG000251386InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT3G24420OMA:EEERYTFPfam:PF00561Pfam:PF12695
PhylomeDB:Q9LK01Proteomes:UP000006548RefSeq:NP_189085.1SMR:Q9LK01
SUPFAM:SSF53474TAIR:AT3G24420UniGene:At.37532UniProt:Q9LK01
Coordinates (TAIR10) chr3:-:8863111..8864883
Molecular Weight (calculated) 30024.30 Da
IEP (calculated) 5.15
GRAVY (calculated) 0.16
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVNQKISGL ASAMNAKIIG SGERSMVLAH GFGGDQSVWD KIIPVLSQSF KVLVFDWLFS GAIKDQTLYD PSKYNSLDVF SDDLIALMEE LKFGPVVFVG
101: HSMSGVIGCA ASIKRPDLFT NLLLIAASPR YINSEDYKGG FESKDIDTII TSIGSNYEAW AVDFSSFVVD SRDSLSVQRF EKSLKKMKPE TALALAKIVF
201: GSDEREILGQ VSVPCHVIQP GNDVVVPVSV AYFMQEKIKG KSTVEIIEDA IGHFPQMTSH LELLGVMRRL LEF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)