AT3G14900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5013442..5015277 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 71224.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.61 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.81 | ||||||||||||||||||||||||
| Length | 611 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSQDLSFSK TLNPSFSFRK SPLNSGVRRI VSVLPAITER NYAFSVKRSE LLLREDGGFR RDVRALAGRS KKKLGGGSSG GRIEGDSDMR KQVKRNAREK 101: SKKLAESLFY RLYNNPDKSR SQILSSHPDK FTEEELEMIG LGYDRMVRFM DKDDPRLRHP YDWFKYGEFG PYSWRGVVVG DPVRGTISDE CVTMIGEVEN 201: HEEFEKIEQH EMNIAFQKRV KELDSNVGLR YFWVFVRHPK WRLSELPWEQ WTLVSEVVVE ADKKQRLDKW NLMGRLGNKS RSLICQCAAW FRPDIVYVKK 301: PVFQCRFEPQ EDFFNSLIPY LNPVTESGFV CEVEDDEGRV ELSTYYGGLC KMLKVRQTAF VDDVVNAYEK LSDEKKSRVL KFLLGNHPNE LLHPYTKEWK 401: AKLEEMELGC DAPDEDEDEI SISGSSEKAE FSEWIEDEAD NDDDDDDDDD DDGEVEEVDD DDNMVVDVEG NVEEDSLEDE IEESDPEEDE RYWEEQFNKA 501: TNNAERMEKL AEMSMVVSDK FYEKQLKALE EREKGEIEGD ELEMRGKKAK VKPEEWKTVG YGRWMKKIKK SRIPPELFLR AAVRPFVYRN LVKEIVLTRH 601: AILEGEIGQK E |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)