AT3G14770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 ASURE: vacuole What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nodulin MtN3 family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nodulin MtN3 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G21460.1); Has 914 Blast hits to 907 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 192; Fungi - 0; Plants - 613; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4957787..4959202 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26469.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.34 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.74 | ||||||||||||||||||||||||||||||||||||||||
| Length | 236 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVFAFNASL SMCKDVAGIA GNIFAFGLFV SPMPTFRRIM RNKSTEQFSG LPYIYALLNC LICLWYGTPF ISHSNAMLMT VNSVGATFQL CYIILFIMHT 101: DKKNKMKMLG LLFVVFAVVG VIVAGSLQIP DQLTRWYFVG FLSCGSLVSM FASPLFVINL VIRTKSVEFM PFYLSLSTFL MSASFLLYGL FNSDAFVYTP 201: NGIGTILGIV QLALYCYYHR NSIEEETKEP LIVSYV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)