AT1G80380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||
| Curator Summary (TAIR10) |
encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. | ||||||||
| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:30217332..30219784 | ||||||||
| Molecular Weight (calculated) | 40835.10 Da | ||||||||
| IEP (calculated) | 6.17 | ||||||||
| GRAVY (calculated) | -0.33 | ||||||||
| Length | 362 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVAISGSSL ISSTLQHYNN RIYIRDYPIP CHSSNPICNS FNFKRRSFSP SSPKFNDHVV NPSSSYLSSK LSPIRTHSSF AACGCSWIQD NSMVHDYATT 101: TNGTSKRCSA LPTTNTVDVS SVSDLFEFIC SGPLVNKIGI TPQRVGQSID KWLLYGSQLC RLFQLNELKL TIPQKARLYH YYIPVFIWCE DQIALHNSKF 201: KDGDDVPRYN KSAYSGRGDR ADSSTWPEVE GPLSVILFEG WMLGFKPLPA DVVKAVDPQL EVVNKNLEAY YDAWDKYIDA WVVIKIQDPS YVYRWRLQAE 301: IAMRQDGQAG MSDEEVNDFV SRYLPAYKAY LPTLYAEGPS GSDPDRVLAI DIDEERNPIL AN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)