AT3G13226.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : regulatory protein RecX family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
regulatory protein RecX family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of DNA repair; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulatory protein RecX (InterPro:IPR003783); Has 1697 Blast hits to 1697 proteins in 756 species: Archae - 0; Bacteria - 1482; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4264442..4266286 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43779.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.72 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.81 | ||||||||||||||||||||||||||||
| Length | 382 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLKLGFRLAI GIQHHRLFRI PWAKRHSVPR ILCSEQRDYC SSGLTKYVPK KSRKITEDLT SQQFDVTRVD HSVLGFQVKG NSKEARDGSF LDLQEENDTG 101: SYTNVSCDDS DEGFMSLDKG IDASRLDHSV LGSKVKANIK ETGEDTDFHL RDKNDADMYS DVSCDDSNDE SSNEVRSTGY KSTRQHKQAY DKIKLHLEAE 201: QAKSSKEACK TTQDAEHMAI RYLGLRAYSA ADLKKKLIGK KYPIEVVDKV IDDFQIRGFV NDSLYAESFT RSRWSSLSWG PRRIKQALFK KGISNKDSET 301: AIKLVFEKRQ CNEGDEEAEL NHGLSKEAVD QLYVQASKRW LQGRDLPTET RKTRVIRWLQ YRGFNWGVVT QLLKRLESTH ES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)