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AT3G11260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WUSCHEL related homeobox 5
Curator
Summary (TAIR10)
Arabidopsis thaliana WOX5 protein mRNA
Computational
Description (TAIR10)
WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 7 (TAIR:AT5G05770.1); Has 538 Blast hits to 538 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 538; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1MMeggNOG:ENOG410YNZ0EMBL:AB493609EnsemblPlants:AT3G11260
EnsemblPlants:AT3G11260.1entrez:820297ExpressionAtlas:C0SVA6Gene3D:1.10.10.60
GeneID:820297GO:GO:0003677GO:GO:0005634Gramene:AT3G11260.1
hmmpanther:PTHR24326hmmpanther:PTHR24326:SF149InterPro:IPR001356InterPro:IPR009057
KEGG:ath:AT3G11260OMA:TEMDHPPPaxDb:C0SVA6Pfam:PF00046
Pfam:Q8H1D2Pfscan:PS50071PhylomeDB:C0SVA6PROSITE:PS50071
ProteinModelPortal:C0SVA6RefSeq:NP_187735.2SMART:SM00389SMR:C0SVA6
STRING:3702.AT3G11260.1SUPFAM:SSF46689TAIR:AT3G11260tair10-symbols:WOX5
UniGene:At.39787UniProt:C0SVA6UniProt:Q8H1D2
Coordinates (TAIR10) chr3:+:3527606..3528263
Molecular Weight (calculated) 21226.80 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.93
Length 182 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)