suba logo
AT3G09405.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.648
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pectinacetylesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pectinacetylesterase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09410.1); Has 559 Blast hits to 551 proteins in 94 species: Archae - 2; Bacteria - 43; Metazoa - 119; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XQKDeggNOG:KOG4287EMBL:AC011436
EMBL:CP002686EnsemblPlants:AT3G09405EnsemblPlants:AT3G09405.1entrez:7922320
ESTHER:arath-q9sr23GeneID:7922320Genevisible:Q9SR23GO:GO:0005576
GO:GO:0005618GO:GO:0016787GO:GO:0071555Gramene:AT3G09405.1
hmmpanther:PTHR21562hmmpanther:PTHR21562:SF6HOGENOM:HOG000238558InterPro:IPR004963
InterPro:IPR029058KEGG:ath:AT3G09405OMA:QIRESWHPANTHER:PTHR21562
PaxDb:Q9SR23Pfam:PF03283Pfam:Q9SR23PhylomeDB:Q9SR23
PRIDE:Q9SR23PRO:PR:Q9SR23ProteinModelPortal:Q9SR23Proteomes:UP000006548
RefSeq:NP_001154601.1SMR:Q9SR23STRING:3702.AT3G09405.1SUPFAM:SSF53474
TAIR:AT3G09405UniGene:At.40110UniGene:At.74994UniProt:Q9SR23
Coordinates (TAIR10) chr3:-:2895009..2897366
Molecular Weight (calculated) 45751.50 Da
IEP (calculated) 6.76
GRAVY (calculated) -0.17
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MVIRSLLQCR TWSKSDWLLA SIGIVLIVYS FSLSFNSTSD SIPSVDRSDL VKLKLSSKAK ERGAFCLDGS LPGYHFHKGS GSGSNSWLLY LEGGGGCRTI
101: ESCSARAMTR LGSSNFFEHE VPFFGVLSSD PSQNPDFFNW NRVMIRYCDG ACFSGHPEAE FKNETRLFFR GQLIWEAIMD ELLSMGMSHA KRAMLTGCSA
201: GGLSTLIHCD YFRDHLPKDA TVKCVSDGGY ILNVLDVLGN PTMGSFFHDV VTLQSVDKSL DQNCVAKMEP SKCMFPQESL KNIRTPVFLV NTAYDYWQIQ
301: NGLVPDSPDL DERWKICRLN IQECDAAQMK VLHGFRSSLI DAIGEFHVNK EGGMFINSCN SHCQIRESWH SATSTRIENK TIAESVGDWY FNRKPVKLID
401: CPYPCNASC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)