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AT3G09310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0759eggNOG:ENOG410J0R8EMBL:AC011436EMBL:BT024873
EMBL:CP002686EnsemblPlants:AT3G09310EnsemblPlants:AT3G09310.1entrez:820087
GeneID:820087Genevisible:Q9SR32Gramene:AT3G09310.1HAMAP:MF_00386
hmmpanther:PTHR33383HOGENOM:HOG000231600InParanoid:Q9SR32InterPro:IPR002696
iPTMnet:Q9SR32KEGG:ath:AT3G09310PaxDb:Q9SR32Pfam:PF01809
Pfam:Q9SR32PhylomeDB:Q9SR32PRIDE:Q9SR32PRO:PR:Q9SR32
ProDom:PD004225Proteomes:UP000006548RefSeq:NP_187542.2SMART:SM01234
STRING:3702.AT3G09310.1TAIR:AT3G09310TIGRfam:TIGR00278TIGRFAMs:TIGR00278
UniGene:At.48636UniGene:At.70394UniProt:Q9SR32
Coordinates (TAIR10) chr3:-:2860622..2861297
Molecular Weight (calculated) 19453.20 Da
IEP (calculated) 8.58
GRAVY (calculated) -0.75
Length 170 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVVISIHRP YVTLTISKNR NPLKPHRQFN ESCLRFDHLP RNTKNQLRCL SAKSTPSKPD PASPQDGEEL ESVGVKAALA MLRFYKREIS PVLPRSCRYV
101: PTCSEYSMEA YKKYGVLKGT VLTTWRLCRC NPLGGSGFDP PRWFGESGIK LREGDEEEED NYDDEDQRKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)