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AT3G08970.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.
Computational
Description (TAIR10)
ATERDJ3A; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Thioredoxin-like fold (InterPro:IPR012336), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 29746 Blast hits to 27935 proteins in 3434 species: Archae - 203; Bacteria - 10482; Metazoa - 6798; Fungi - 2759; Plants - 3202; Viruses - 20; Other Eukaryotes - 6282 (source: NCBI BLink).
Protein Annotations
BioGrid:5383eggNOG:COG2214eggNOG:ENOG410IQB3EMBL:AC010871
EMBL:BT003887EMBL:BT005001EMBL:CP002686EnsemblPlants:AT3G08970
EnsemblPlants:AT3G08970.1entrez:820049Gene3D:1.10.287.110Gene3D:3.40.30.10
GeneID:820049Genevisible:Q9SR96GO:GO:0005788GO:GO:0009408
GO:GO:0009506GO:GO:0009860GO:GO:0016491GO:GO:0034605
GO:GO:0055114Gramene:AT3G08970.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF229
HOGENOM:HOG000030834InParanoid:Q9SR96IntAct:Q9SR96InterPro:IPR001623
InterPro:IPR012336InterPro:IPR018253iPTMnet:Q9SR96KEGG:ath:AT3G08970
MINT:MINT-7950490ncoils:CoilOMA:FYDAEVHPaxDb:Q9SR96
Pfam:PF00226Pfam:Q9SR96Pfscan:PS50076PhylomeDB:Q9SR96
PRIDE:Q9SR96PRINTS:PR00625PRO:PR:Q9SR96PROSITE:PS00636
PROSITE:PS50076ProteinModelPortal:Q9SR96Proteomes:UP000006548RefSeq:NP_187509.1
scanprosite:PS00636SMART:SM00271SMR:Q9SR96STRING:3702.AT3G08970.1
SUPFAM:SSF46565SUPFAM:SSF52833TAIR:AT3G08970tair10-symbols:ATERDJ3A
tair10-symbols:TMS1UniGene:At.40191UniProt:Q9SR96
Coordinates (TAIR10) chr3:+:2737589..2740265
Molecular Weight (calculated) 62573.40 Da
IEP (calculated) 10.10
GRAVY (calculated) -0.49
Length 572 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRTRLAISV VLVSTLLLLN VKAKSVDPYK VLGVSKDAKQ REIQKAFHKQ SLKYHPDKNK DKGAQEKFAE INNAYEILSD EEKRKNYDLY GDEKGQPGFD
101: SGFPGGNGGY SYSSSGGGFN FGGPGGWQNM GGGGGSKSFS FSFGGPSESS FGFGMDDIFS MFSGGSSKGK EQFGGFGSSS NAESKSKSST VAAIKTINSQ
201: VYKKDVVDQG MTWLLLSYLP SQRGSQYHES IIEEVAESLQ GALKVGRLNC ETESSLCKQL GIVPRRAPRM FVYSYTSSGK ATLAEYTEEL VAKKVKSFCQ
301: EHLPRFSKKI DLNTFDVSAV SSQKTPKVLL LSTKKDTPVI WRVLSGLYNG RFVFYNTEVH DTSDPKIQKL GVDKFPAIVG WLSNGEKQVL KTGITVKNLK
401: SAVQELGKLL EGLEKKNKKV SSKSQAGQAP NESSEKIPLL SRPNFDSICG ENTPVCIIGA FRSSNGKEKL QSIMSKVSQK SLSRRQASTT GSQDTVSYSL
501: LDATKQSAFL SSLDKSEFKT SSDKLLIAYK PRRGKFATFK GDMTIEEVEK FVAAVLNGDI QFTKTRQKPQ IK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)